Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB15661.1Transcriptional regulator; PFAM: HTH domain; AsnC family. (142 aa)    
Predicted Functional Partners:
AGB15119.1
PFAM: Bacterial regulatory protein, arsR family; Archaeal TRASH domain.
  
   
 0.775
AGB16016.1
Transcriptional regulator; PFAM: HTH domain.
  
   
 0.746
AGB15284.1
Transcriptional regulator; PFAM: AsnC family.
  
   
 0.654
AGB15584.1
Transcriptional regulator; PFAM: AsnC family.
 
 
 
 0.592
AGB15659.1
PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family.
       0.544
AGB17256.1
PFAM: Bacterial regulatory protein, arsR family; AsnC family.
  
   
0.540
AGB15660.1
Hypothetical protein.
       0.528
AGB15662.1
NosL; PFAM: NosL.
  
    0.522
AGB15586.1
Transcriptional regulator; PFAM: AsnC family.
   
 
 0.439
AGB15663.1
DMT(drug/metabolite transporter) superfamily permease; PFAM: EamA-like transporter family.
       0.408
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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