Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
AGB15663.1DMT(drug/metabolite transporter) superfamily permease; PFAM: EamA-like transporter family. (298 aa)    
Predicted Functional Partners:
AGB15662.1
NosL; PFAM: NosL.
       0.629
AGB16681.1
Kef-type K+ transport system, membrane component; PFAM: Sodium/hydrogen exchanger family.
 
  
 0.479
AGB15661.1
Transcriptional regulator; PFAM: HTH domain; AsnC family.
       0.408
AGB17577.1
Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies); Ion channel.
   
 
 0.402
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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