Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB15690.1Hypothetical protein. (84 aa)    
Predicted Functional Partners:
rps27e
PFAM: Ribosomal protein S27.
       0.809
rpl44e
Ribosomal protein L44E; Binds to the 23S rRNA.
       0.809
AGB15687.1
PFAM: Eukaryotic translation initiation factor 2 alpha subunit; S1 RNA binding domain.
       0.803
nop10
Putative Zn-ribbon RNA-binding protein; Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA.
       0.779
AGB15685.1
PFAM: PAC2 family; TIGRFAM: TIGR00162 family protein.
       0.778
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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