Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGB15716.1PFAM: DoxX. (185 aa)    
Predicted Functional Partners:
AGB15499.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
  
 
 0.915
AGB16240.1
Putative membrane protein; PFAM: DoxX.
  
  
 
0.904
AGB16698.1
5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase; PFAM: 5'-nucleotidase, C-terminal domain.
     
  0.900
AGB15381.1
Hypothetical protein.
  
     0.687
AGB15183.1
PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, archaeal type.
 
    0.587
AGB17233.1
PFAM: CAAX amino terminal protease family.
 
     0.585
AGB15890.1
Putative ATPase; PFAM: Domain of unknown function DUF87.
  
     0.572
AGB14659.1
PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain.
   
  0.568
AGB15104.1
Membrane-associated phospholipid phosphatase; PFAM: PAP2 superfamily.
 
    0.567
AGB14963.1
PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, archaeal type.
 
    0.559
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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