STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB15731.1Hypothetical protein. (204 aa)    
Predicted Functional Partners:
AGB15733.1
Membrane protein implicated in regulation of membrane protease activity; PFAM: NfeD-like.
       0.717
AGB15475.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
  
     0.668
AGB16787.1
Putative phosphatase; PFAM: haloacid dehalogenase-like hydrolase.
  
     0.660
AGB15350.1
PFAM: Acetyltransferase (GNAT) family.
  
     0.651
AGB16429.1
Hypothetical protein.
  
     0.647
AGB15848.1
Putative Fe-S oxidoreductase; PFAM: Uncharacterised protein family (UPF0153).
  
     0.639
AGB15205.1
Putative DHD superfamily phosphohydrolase.
  
     0.633
AGB15732.1
Membrane protease subunit, stomatin/prohibitin; PFAM: SPFH domain / Band 7 family.
       0.632
AGB15542.1
Hypothetical protein.
  
     0.601
AGB15730.1
Hypothetical protein.
       0.590
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.