Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB15822.1Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix. (115 aa)    
Predicted Functional Partners:
AGB16190.1
Growth inhibitor; PFAM: PemK-like protein.
   
    0.674
AGB15821.1
Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
 
     0.571
AGB15312.1
Phosphate uptake regulator; PFAM: SpoVT / AbrB like domain.
   
  
 0.481
AGB17339.1
DEAD_2 domain-containing protein; PFAM: DEAD_2.
      
 0.466
AGB15545.1
Pirin-related protein; PFAM: Pirin C-terminal cupin domain; Pirin; Belongs to the pirin family.
 
   
 0.400
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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