Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB15829.1Putative coiled-coil protein. (300 aa)    
Predicted Functional Partners:
AGB15939.1
acyl-CoA synthetase (NDP forming); PFAM: CoA binding domain; TIGRFAM: acetyl coenzyme A synthetase (ADP forming), alpha domain.
       0.852
AGB15306.1
PFAM: PUA domain; Queuine tRNA-ribosyltransferase; TIGRFAM: uncharacterized domain 2.
 
   
 0.835
AGB16473.1
PFAM: Uncharacterised protein family (UPF0179); Belongs to the UPF0179 family.
  
     0.734
AGB15052.1
Phosphoserine phosphatase SerB; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB.
      0.729
AGB17135.1
Hypothetical protein.
  
     0.729
AGB16625.1
Putative transcriptional regulator; PFAM: Helix-turn-helix.
 
     0.726
AGB14657.1
PFAM: Peptidase S24-like.
  
     0.715
AGB15332.1
TIGRFAM: TIGR01210 family protein.
  
     0.715
AGB15438.1
Putative metal-dependent protease of the PAD1/JAB1 superfamily.
  
     0.711
AGB16180.1
Single-stranded DNA-binding protein.
 
     0.709
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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