Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB15847.1Putative RNA-binding protein, contains TRAM domain; PFAM: TRAM domain. (134 aa)    
Predicted Functional Partners:
AGB15846.1
Putative Fe-S oxidoreductase; PFAM: Radical SAM superfamily.
       0.776
rnp3
RNase P/RNase MRP subunit p30; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family.
  
     0.686
AGB15848.1
Putative Fe-S oxidoreductase; PFAM: Uncharacterised protein family (UPF0153).
 
     0.670
AGB16318.1
PFAM: Protein of unknown function (DUF447).
  
     0.644
AGB17003.1
ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase; PFAM: ACT domain.
  
     0.644
AGB17360.1
Histones H3 and H4; PFAM: Histone-like transcription factor (CBF/NF-Y) and archaeal histone.
  
    0.626
AGB15911.1
Archaeal flagella assembly protein J; PFAM: Bacterial type II secretion system protein F domain.
  
     0.566
ef1b
Translation elongation factor aEF-1 beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.
  
  
 0.560
AGB15717.1
Putative threonine efflux protein; PFAM: LysE type translocator.
  
     0.551
AGB16319.1
Triphosphoribosyl-dephospho-CoA synthetase; PFAM: ATP:dephospho-CoA triphosphoribosyl transferase.
  
     0.531
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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