Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB15850.1PFAM: Bacterial regulatory proteins, gntR family. (96 aa)    
Predicted Functional Partners:
AGB15848.1
Putative Fe-S oxidoreductase; PFAM: Uncharacterised protein family (UPF0153).
 
     0.910
AGB15849.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily.
     
 0.869
AGB15851.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
       0.749
AGB15852.1
PFAM: Glycosyl transferase family 2.
       0.720
AGB15376.1
PFAM: Trm112p-like protein.
  
    0.649
AGB16480.1
Putative acyltransferase; PFAM: Protein of unknown function, DUF583.
  
     0.619
AGB16292.1
PFAM: Uncharacterized protein conserved in archaea (DUF2150).
  
     0.606
AGB15475.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
  
     0.604
AGB14661.1
PFAM: Zn-ribbon containing protein (DUF2072).
  
     0.557
AGB16662.1
PFAM: Integral membrane protein DUF106.
 
     0.553
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.