STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB15852.1PFAM: Glycosyl transferase family 2. (298 aa)    
Predicted Functional Partners:
AGB15851.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
   
   0.652
AGB15542.1
Hypothetical protein.
  
     0.566
AGB15731.1
Hypothetical protein.
  
     0.531
AGB16092.1
Hypothetical protein.
  
     0.512
AGB17495.1
PFAM: Sugar-specific transcriptional regulator TrmB.
  
     0.505
AGB15609.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2.
 
 
 0.489
AGB14808.1
Putative nuclease of the RecB family; PFAM: Protein of unknown function DUF91; Topoisomerase DNA binding C4 zinc finger.
  
     0.468
AGB16793.1
Hypothetical protein.
  
     0.467
AGB15848.1
Putative Fe-S oxidoreductase; PFAM: Uncharacterised protein family (UPF0153).
 
     0.452
AGB17123.1
Uncharacterized protein, possibly involved in glyoxylate utilization; PFAM: Cupin domain.
  
     0.436
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.