Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB15860.1Flavin-dependent dehydrogenase; PFAM: Lycopene cyclase protein. (434 aa)    
Predicted Functional Partners:
AGB15549.1
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
 
 
 0.954
carS
CDP-diglyceride synthetase; Catalyzes the formation of CDP-2,3-bis-(O-geranylgeranyl)-sn- glycerol (CDP-archaeol) from 2,3-bis-(O-geranylgeranyl)-sn-glycerol 1- phosphate (DGGGP) and CTP. This reaction is the third ether-bond- formation step in the biosynthesis of archaeal membrane lipids.
  
  
 0.953
AGB17056.1
Geranylgeranyl reductase family protein; PFAM: Tryptophan halogenase; FAD binding domain; TIGRFAM: geranylgeranyl reductase family.
  
  
 
0.930
AGB16477.1
Flavin-dependent dehydrogenase; PFAM: FAD binding domain.
 
 
 0.653
AGB16479.1
Electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein domain.
 
 
 0.585
AGB16084.1
Flavin-dependent dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
  
     0.583
AGB15858.1
Phytoene/squalene synthetase; PFAM: Squalene/phytoene synthase.
 
  
 0.575
AGB17177.1
Electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein domain.
  
 
 0.520
AGB15815.1
Phytoene/squalene synthetase; PFAM: Squalene/phytoene synthase.
 
  
 0.491
AGB15859.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
  
  
 0.487
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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