Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene co-occurrence
gene fusions
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[Homology]
Score
AGB15925.1Putative membrane protein; PFAM: VIT family; TIGRFAM: TIGR00267 family protein. (190 aa)    
Predicted Functional Partners:
AGB15926.1
Hypothetical protein; PFAM: Uncharacterized ArCR, COG1888.
 
     0.959
AGB17447.1
Hypothetical protein.
  
     0.616
AGB15226.1
Hypothetical protein.
  
     0.583
AGB15936.1
PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
 
 
 
 0.506
AGB17560.1
Hypothetical protein.
  
     0.488
AGB17123.1
Uncharacterized protein, possibly involved in glyoxylate utilization; PFAM: Cupin domain.
  
     0.477
AGB17219.1
PFAM: HTH DNA binding domain.
  
     0.469
AGB14837.1
PFAM: HTH DNA binding domain.
  
     0.449
AGB17537.1
P-type ATPase, translocating; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC.
   
 
 0.441
AGB15927.1
Hypothetical protein.
       0.425
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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