Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB16016.1Transcriptional regulator; PFAM: HTH domain. (171 aa)    
Predicted Functional Partners:
AGB15119.1
PFAM: Bacterial regulatory protein, arsR family; Archaeal TRASH domain.
  
   
 0.811
AGB15661.1
Transcriptional regulator; PFAM: HTH domain; AsnC family.
  
   
 0.746
AGB16035.1
Hypothetical protein.
  
   
 0.606
AGB15284.1
Transcriptional regulator; PFAM: AsnC family.
  
   
 0.492
AGB16017.1
Hypothetical protein.
       0.456
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.