Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB16124.1ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family. (376 aa)    
Predicted Functional Partners:
AGB16126.1
ABC-type Mn2+/Zn2+ transport system, permease component; PFAM: ABC 3 transport family.
 
 
 0.997
AGB16125.1
ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter.
 
 
 0.996
AGB14980.1
ABC-type Mn2+/Zn2+ transport system, permease component; PFAM: ABC 3 transport family.
 
 
 0.988
AGB14981.1
ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter.
 
 
 0.988
AGB14982.1
ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family.
  
  
 
0.917
rps14
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles.
  
  
 0.652
AGB16123.1
Hypothetical protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain.
       0.498
AGB16127.1
PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase.
       0.486
AGB17007.1
PFAM: Tetratricopeptide repeat.
 
  
 0.471
AGB17422.1
Hypothetical protein.
  
  
 0.421
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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