Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB16183.1PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase. (964 aa)    
Predicted Functional Partners:
AGB16182.1
Putative phosphoesterase, ICC.
 
    0.916
AGB16180.1
Single-stranded DNA-binding protein.
 
   
 0.823
AGB16181.1
Hypothetical protein.
 
     0.666
AGB16298.1
Putative transcriptional regulator; PFAM: Helix-turn-helix.
  
     0.621
AGB15827.1
Putative membrane protein; PFAM: Domain of unknown function (DUF373).
  
     0.594
AGB17171.1
Putative membrane protein; PFAM: Domain of unknown function (DUF373).
  
     0.591
AGB16184.1
PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor-related protein.
       0.559
AGB17017.1
ATP-grasp superfamily enzyme; PFAM: PAC2 family; TIGRFAM: TIGR00161 family protein.
  
     0.538
AGB15369.1
Putative phosphoesterase, ICC.
 
    0.537
AGB16740.1
Hypothetical protein.
 
    0.532
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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