Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGB16195.1PFAM: Glycosyl transferase family 2. (418 aa)    
Predicted Functional Partners:
AGB16194.1
PFAM: Protein of unknown function (DUF354).
 
  
 0.895
AGB17434.1
PFAM: Protein of unknown function (DUF354).
 
  
 0.569
AGB15246.1
Hypothetical protein.
 
  
 0.529
AGB15482.1
PFAM: Glycosyl transferase family 2.
  
   
 0.526
AGB15608.1
Putative membrane protein, required for N-linked glycosylation; PFAM: Oligosaccharyl transferase STT3 subunit.
 
 
 0.465
AGB17247.1
PFAM: Glycosyl transferase family 2.
  
     0.446
AGB14805.1
TPR repeat-containing protein; PFAM: Tetratricopeptide repeat.
 
 
 0.437
AGB16508.1
PFAM: Bacterial regulatory protein, arsR family; MarR family.
  
     0.412
AGB15253.1
Putative membrane protein; PFAM: Protein of unknown function (DUF1616).
 
     0.407
AGB15104.1
Membrane-associated phospholipid phosphatase; PFAM: PAP2 superfamily.
 
  
 0.403
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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