Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB16281.1Putative domain HDIG-containing protein; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG. (198 aa)    
Predicted Functional Partners:
AGB16282.1
PFAM: EthD protein; TIGRFAM: conserved hypothetical protein.
       0.895
AGB15233.1
Hypothetical protein.
  
     0.728
AGB15126.1
Hypothetical protein.
  
     0.707
AGB15884.1
PFAM: Bacterial protein of unknown function (DUF839).
  
     0.678
AGB16193.1
Site-specific recombinase XerD.
  
     0.631
AGB16277.1
PFAM: NAD dependent epimerase/dehydratase family.
 
     0.628
AGB16275.1
Xaa-Pro aminopeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain.
 
    0.567
AGB17592.1
Putative nucleic acid-binding protein, contains PIN domain; PFAM: PIN domain.
  
     0.532
AGB16274.1
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like monooxygenase.
  
     0.526
AGB16141.1
PFAM: HTH DNA binding domain.
  
     0.523
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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