Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB16292.1PFAM: Uncharacterized protein conserved in archaea (DUF2150). (192 aa)    
Predicted Functional Partners:
AGB16293.1
Putative metal-dependent hydrolase (urease superfamily); PFAM: TatD related DNase.
 
     0.860
AGB15848.1
Putative Fe-S oxidoreductase; PFAM: Uncharacterised protein family (UPF0153).
  
     0.744
AGB16290.1
3-hydroxy-3-methylglutaryl CoA synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase N terminal; Hydroxymethylglutaryl-coenzyme A synthase C terminal.
       0.743
AGB15608.1
Putative membrane protein, required for N-linked glycosylation; PFAM: Oligosaccharyl transferase STT3 subunit.
  
     0.738
AGB17134.1
Single-stranded DNA-binding protein.
  
     0.730
AGB15747.1
Hypothetical protein.
  
     0.727
AGB16480.1
Putative acyltransferase; PFAM: Protein of unknown function, DUF583.
  
     0.717
AGB16738.1
PFAM: Protein of unknown function (DUF555); Belongs to the UPF0212 family.
  
     0.717
AGB15118.1
PFAM: Protein of unknown function (DUF552).
  
     0.712
AGB15164.1
PFAM: Protein of unknown function (DUF460).
  
     0.706
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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