Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB16429.1Hypothetical protein. (195 aa)    
Predicted Functional Partners:
AGB16430.1
PFAM: NOL1/NOP2/sun family; TIGRFAM: NOL1/NOP2/sun family putative RNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
     0.932
AGB15731.1
Hypothetical protein.
  
     0.647
AGB16787.1
Putative phosphatase; PFAM: haloacid dehalogenase-like hydrolase.
  
     0.638
AGB15848.1
Putative Fe-S oxidoreductase; PFAM: Uncharacterised protein family (UPF0153).
  
     0.623
AGB15205.1
Putative DHD superfamily phosphohydrolase.
  
     0.607
AGB17017.1
ATP-grasp superfamily enzyme; PFAM: PAC2 family; TIGRFAM: TIGR00161 family protein.
       0.594
AGB14919.1
DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase.
  
     0.583
AGB15350.1
PFAM: Acetyltransferase (GNAT) family.
  
     0.573
AGB14808.1
Putative nuclease of the RecB family; PFAM: Protein of unknown function DUF91; Topoisomerase DNA binding C4 zinc finger.
  
     0.572
AGB17339.1
DEAD_2 domain-containing protein; PFAM: DEAD_2.
  
     0.569
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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