Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AGB16473.1PFAM: Uncharacterised protein family (UPF0179); Belongs to the UPF0179 family. (148 aa)    
Predicted Functional Partners:
AGB16472.1
Hypothetical protein.
       0.833
AGB15829.1
Putative coiled-coil protein.
  
     0.734
mptD
Hypothetical protein; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family.
  
     0.731
AGB16625.1
Putative transcriptional regulator; PFAM: Helix-turn-helix.
  
     0.730
AGB15332.1
TIGRFAM: TIGR01210 family protein.
  
     0.728
AGB15438.1
Putative metal-dependent protease of the PAD1/JAB1 superfamily.
  
     0.711
AGB17695.1
Putative regulator of amino acid metabolism, contains ACT domain.
  
   
 0.701
AGB17668.1
Putative transcriptional regulator, contains C-terminal CBS domains; PFAM: CBS domain.
  
    0.697
AGB15995.1
Uncharacterized protein conserved in archaea; PFAM: RNA polymerase Rpb4.
 
     0.695
AGB15380.1
Hypothetical protein.
  
     0.677
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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