Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB16480.1Putative acyltransferase; PFAM: Protein of unknown function, DUF583. (287 aa)    
Predicted Functional Partners:
AGB16481.1
Hypothetical protein.
       0.815
AGB14661.1
PFAM: Zn-ribbon containing protein (DUF2072).
  
     0.742
AGB15118.1
PFAM: Protein of unknown function (DUF552).
  
     0.731
AGB16292.1
PFAM: Uncharacterized protein conserved in archaea (DUF2150).
  
     0.717
AGB15747.1
Hypothetical protein.
  
     0.713
AGB14660.1
PFAM: Uncharacterized protein conserved in archaea (DUF2073).
  
     0.712
AGB16738.1
PFAM: Protein of unknown function (DUF555); Belongs to the UPF0212 family.
  
     0.712
AGB15370.1
Putative membrane protein; PFAM: Transmembrane exosortase (Exosortase_EpsH).
  
     0.699
AGB16143.1
PFAM: Protein of unknown function (DUF555); Belongs to the UPF0212 family.
  
     0.696
AGB17134.1
Single-stranded DNA-binding protein.
  
     0.695
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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