Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB16487.1PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: putative hydrolase; uncharacterized protein, coenzyme F420 biosynthesis associated. (323 aa)    
Predicted Functional Partners:
AGB16488.1
Hypothetical protein.
       0.695
AGB16489.1
PFAM: Protein kinase domain; FHA domain.
 
     0.590
AGB16495.1
Small nuclear ribonucleoprotein; PFAM: LSM domain.
       0.556
rpl37e
Ribosomal protein L37E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family.
       0.527
AGB16491.1
PFAM: Protein kinase domain; FHA domain.
 
     0.522
psmB
Proteasome endopeptidase complex, archaeal, beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
  
     0.502
AGB15703.1
Peptidase family protein; PFAM: M42 glutamyl aminopeptidase.
       0.491
AGB16490.1
PFAM: Protein phosphatase 2C.
       0.444
AGB15860.1
Flavin-dependent dehydrogenase; PFAM: Lycopene cyclase protein.
  
     0.412
AGB15209.1
PFAM: Universal stress protein family.
  
    0.404
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.