STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB16573.1Sugar phosphate permease; PFAM: Major Facilitator Superfamily. (430 aa)    
Predicted Functional Partners:
dphB
Diphthine synthase; S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.
       0.536
AGB15911.1
Archaeal flagella assembly protein J; PFAM: Bacterial type II secretion system protein F domain.
  
     0.498
AGB17260.1
Putative metal-binding protein.
  
     0.469
AGB16044.1
PFAM: Succinylglutamate desuccinylase / Aspartoacylase family.
  
     0.465
AGB16318.1
PFAM: Protein of unknown function (DUF447).
  
     0.458
AGB15837.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; manually curated.
  
     0.456
AGB17598.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
  
     0.456
AGB17298.1
Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family; PFAM: NUDIX domain; Initiation factor 2 subunit family; Belongs to the eIF-2B alpha/beta/delta subunits family.
  
 
   0.446
AGB16575.1
Putative translation initiation inhibitor, yjgF family; PFAM: Endoribonuclease L-PSP.
  
    0.400
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.