STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB16610.1Putative RND superfamily exporter; PFAM: MMPL family; TIGRFAM: The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family. (991 aa)    
Predicted Functional Partners:
AGB15104.1
Membrane-associated phospholipid phosphatase; PFAM: PAP2 superfamily.
 
     0.521
AGB15492.1
PFAM: PAP2 superfamily.
 
     0.479
AGB15246.1
Hypothetical protein.
  
     0.465
AGB16611.1
PFAM: Bacterial regulatory proteins, tetR family.
 
     0.464
AGB17455.1
PFAM: HTH DNA binding domain.
  
     0.457
AGB17478.1
Hypothetical protein.
  
     0.452
AGB15502.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
 
     0.433
AGB16194.1
PFAM: Protein of unknown function (DUF354).
  
     0.418
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.