Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB16681.1Kef-type K+ transport system, membrane component; PFAM: Sodium/hydrogen exchanger family. (421 aa)    
Predicted Functional Partners:
AGB16680.1
Putative regulatory ligand binding protein, C-terminal domain of K+ channels like protein; PFAM: TrkA-C domain.
 
  
 0.959
AGB17597.1
Putative permease, DMT superfamily; PFAM: EamA-like transporter family.
  
  
 0.854
AGB16063.1
Helicase family protein with metal-binding cysteine cluster; PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase.
   
    0.846
AGB15452.1
Hypothetical protein.
   
    0.694
AGB15370.1
Putative membrane protein; PFAM: Transmembrane exosortase (Exosortase_EpsH).
   
    0.691
AGB17233.1
PFAM: CAAX amino terminal protease family.
   
    0.691
AGB17484.1
PFAM: CAAX amino terminal protease family.
   
    0.691
AGB17144.1
PFAM: Integral membrane protein DUF95.
  
    0.597
AGB16682.1
PFAM: Amino acid permease; Universal stress protein family.
  
 
 0.594
AGB15936.1
PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
  
 
 0.536
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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