Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB16682.1PFAM: Amino acid permease; Universal stress protein family. (793 aa)    
Predicted Functional Partners:
AGB16676.1
PFAM: Catalase; DJ-1/PfpI family; Catalase-related immune-responsive.
  
 
 0.650
AGB14805.1
TPR repeat-containing protein; PFAM: Tetratricopeptide repeat.
 
 
 0.641
AGB16489.1
PFAM: Protein kinase domain; FHA domain.
 
 0.628
AGB16681.1
Kef-type K+ transport system, membrane component; PFAM: Sodium/hydrogen exchanger family.
  
 
 0.594
AGB15941.1
PFAM: Sodium:dicarboxylate symporter family.
 
 
 0.589
AGB16491.1
PFAM: Protein kinase domain; FHA domain.
 
 0.574
AGB14706.1
Ankyrin repeat-containing protein; PFAM: Ankyrin repeat.
 
 0.569
AGB15936.1
PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
  
 
 0.515
AGB17537.1
P-type ATPase, translocating; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC.
  
 
 0.515
dnaK
Chaperone protein DnaK; Acts as a chaperone.
  
 
 0.513
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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