Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGB16689.1PFAM: Uncharacterized protein conserved in archaea (DUF2240). (151 aa)    
Predicted Functional Partners:
AGB16688.1
Hypothetical protein.
       0.904
rps8e
PFAM: Ribosomal protein S8e; TIGRFAM: ribosomal protein S8.e.
       0.814
AGB16619.1
Ribonuclease HI.
       0.751
AGB17135.1
Hypothetical protein.
  
     0.725
AGB14657.1
PFAM: Peptidase S24-like.
  
     0.702
AGB17134.1
Single-stranded DNA-binding protein.
  
     0.696
atpF
Archaeal/vacuolar-type H+-ATPase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
     0.696
AGB16014.1
Hypothetical protein; PFAM: PRC-barrel domain.
  
     0.695
AGB15306.1
PFAM: PUA domain; Queuine tRNA-ribosyltransferase; TIGRFAM: uncharacterized domain 2.
  
     0.694
AGB14742.1
Hypothetical protein; PFAM: PRC-barrel domain.
  
     0.691
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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