STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB16725.1Putative transcriptional regulator, contains C-terminal CBS domains; PFAM: CBS domain. (398 aa)    
Predicted Functional Partners:
AGB17668.1
Putative transcriptional regulator, contains C-terminal CBS domains; PFAM: CBS domain.
 
    0.749
AGB14670.1
Putative signal-transduction protein containing cAMP-binding and CBS domains; PFAM: CBS domain.
  
    0.702
AGB15279.1
PFAM: AICARFT/IMPCHase bienzyme; Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent.
  
  
 0.613
AGB16057.1
Putative transcriptional regulator, contains C-terminal CBS domains; PFAM: Domain of unknown function.
   
    0.573
fau-1
Protein of unknown function (DUF402); Probable RNase involved in rRNA stability through maturation and/or degradation of precursor rRNAs. Binds to RNA in loop regions with AU-rich sequences.
 
     0.564
AGB16787.1
Putative phosphatase; PFAM: haloacid dehalogenase-like hydrolase.
 
     0.561
AGB16429.1
Hypothetical protein.
  
     0.539
AGB16724.1
TIGRFAM: lycopene cyclase domain.
       0.525
AGB17657.1
Thioredoxin-like protein; PFAM: NifU-like domain.
 
     0.497
AGB15205.1
Putative DHD superfamily phosphohydrolase.
  
     0.481
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.