Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB16732.1Outer membrane lipoprotein-sorting protein. (368 aa)    
Predicted Functional Partners:
AGB14909.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
   
 
 0.757
AGB16979.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
   
 
 0.757
AGB16243.1
PFAM: Protein of unknown function (DUF2910).
  
     0.621
AGB16790.1
PFAM: E3 Ubiquitin ligase.
  
     0.610
AGB16733.1
Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Glutaredoxin; TIGRFAM: thioredoxin-disulfide reductase; Glutaredoxin, GrxC family.
  
    0.585
AGB16220.1
PFAM: Polysaccharide deacetylase.
  
     0.574
AGB15662.1
NosL; PFAM: NosL.
  
     0.553
AGB15584.1
Transcriptional regulator; PFAM: AsnC family.
 
    0.541
AGB15901.1
Chemotaxis protein CheC, inhibitor of MCP methylation; PFAM: CheC-like family.
 
     0.527
AGB17085.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
     0.527
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.