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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB16803.1PFAM: Sodium:solute symporter family; TIGRFAM: sodium/proline symporter; transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (573 aa)    
Predicted Functional Partners:
AGB16836.1
PFAM: Proline dehydrogenase.
 
  
 0.803
AGB16804.1
Hypothetical protein.
       0.800
AGB16802.1
Hypothetical protein.
       0.790
AGB15696.1
PRPP-binding protein, adenine/guanine phosphoribosyltransferase; May catalyze a purine salvage reaction, the substrate is unknown.
   
  
 0.639
AGB15941.1
PFAM: Sodium:dicarboxylate symporter family.
 
  
 0.585
AGB15025.1
PFAM: Aldehyde dehydrogenase family.
  
  
 0.564
AGB15675.1
PFAM: Aldehyde dehydrogenase family.
  
  
 0.564
AGB15877.1
PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
  
  
 0.564
AGB16718.1
PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
  
  
 0.564
AGB17711.1
PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
  
  
 0.564
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.