Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB16826.1Hypothetical protein. (116 aa)    
Predicted Functional Partners:
AGB17455.1
PFAM: HTH DNA binding domain.
  
     0.608
AGB16825.1
Hypothetical protein.
       0.542
AGB16936.1
Xaa-Pro aminopeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain.
  
     0.485
AGB16827.1
Cation/cationic drug transporter; PFAM: Small Multidrug Resistance protein.
       0.481
AGB14732.1
Cytotoxic translational repressor of toxin-antitoxin stability system; PFAM: Plasmid stabilisation system protein.
  
     0.471
AGB16824.1
Putative GTPase, probable translation factor; PFAM: GTPase of unknown function; GTPase of unknown function C-terminal; TGS domain.
 
     0.451
AGB16508.1
PFAM: Bacterial regulatory protein, arsR family; MarR family.
  
     0.443
AGB16650.1
PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III.
  
     0.438
AGB17391.1
Hypothetical protein.
  
     0.428
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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