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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB16860.1PFAM: Aminotransferase class I and II. (366 aa)    
Predicted Functional Partners:
AGB15435.1
PFAM: Aminotransferase class I and II.
  
  
 
0.916
AGB16404.1
PFAM: Aminotransferase class I and II.
  
  
 
0.915
argG
PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
  0.914
AGB16072.1
Cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme.
  
  
  0.914
AGB17275.1
PFAM: Prephenate dehydratase; ACT domain.
 
  
  0.913
AGB14849.1
Cystathionine beta-lyase/cystathionine gamma-synthase; PFAM: Cys/Met metabolism PLP-dependent enzyme.
     
  0.900
AGB15141.1
L-asparaginase/GlutRNAGln amidotransferase subunit D; PFAM: Asparaginase.
     
  0.900
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
  0.900
AGB15476.1
PFAM: Prephenate dehydrogenase.
     
  0.900
AGB15499.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
     
  0.900
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.