Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB16976.1PFAM: Vitamin K-dependent gamma-carboxylase. (530 aa)    
Predicted Functional Partners:
AGB17233.1
PFAM: CAAX amino terminal protease family.
  
     0.590
AGB17144.1
PFAM: Integral membrane protein DUF95.
  
     0.563
AGB17706.1
Hypothetical protein.
  
     0.490
AGB15104.1
Membrane-associated phospholipid phosphatase; PFAM: PAP2 superfamily.
  
     0.470
AGB16977.1
PFAM: HTH DNA binding domain.
       0.444
AGB15716.1
PFAM: DoxX.
  
     0.430
AGB17317.1
PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
  
     0.416
AGB17455.1
PFAM: HTH DNA binding domain.
  
     0.412
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.