Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB16981.1ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease. (405 aa)    
Predicted Functional Partners:
AGB16980.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
     0.973
AGB16979.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
  
 
 0.930
AGB14909.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
  
 
 0.708
AGB16982.1
Putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain protein; PFAM: Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A).
       0.556
AGB17352.1
Putative membrane-associated Zn-dependent protease; PFAM: Peptidase family M50.
 
  
 0.545
AGB16222.1
Hypothetical protein.
  
     0.540
AGB16048.1
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; PFAM: UbiA prenyltransferase family.
 
     0.528
AGB15535.1
PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain.
 
     0.494
AGB15226.1
Hypothetical protein.
  
     0.457
AGB16937.1
Putative HAD superfamily hydrolase; PFAM: haloacid dehalogenase-like hydrolase.
 
    0.451
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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