STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGB16990.1Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase. (343 aa)    
Predicted Functional Partners:
AGB14849.1
Cystathionine beta-lyase/cystathionine gamma-synthase; PFAM: Cys/Met metabolism PLP-dependent enzyme.
  
 
 0.908
AGB15997.1
Cystathionine beta-lyase/cystathionine gamma-synthase; PFAM: Cys/Met metabolism PLP-dependent enzyme.
  
 
 0.908
AGB17328.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily.
  
 
  0.908
AGB14922.1
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis; PFAM: MoeZ/MoeB domain; ThiF family.
  
    0.558
AGB17615.1
Hypothetical protein; TIGRFAM: bacteriocin biosynthesis cyclodehydratase domain; bacteriocin biosynthesis cyclodehydratase, SagC family.
  
    0.558
AGB17560.1
Hypothetical protein.
  
     0.515
AGB14985.1
Thioredoxin domain-containing protein; PFAM: Thioredoxin; TIGRFAM: thioredoxin.
  
 
 0.479
AGB17482.1
PFAM: Thioredoxin; TIGRFAM: thioredoxin.
  
 
 0.479
AGB17505.1
PFAM: Thioredoxin; TIGRFAM: thioredoxin.
  
 
 0.479
AGB16676.1
PFAM: Catalase; DJ-1/PfpI family; Catalase-related immune-responsive.
  
 
 0.454
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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