Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB16999.1Putative membrane protein; PFAM: Rhomboid family. (201 aa)    
Predicted Functional Partners:
rps10
Ribosomal protein S10/S20; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
  
    0.768
tuf
Translation elongation factor EF-1 alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
     
 0.754
AGB15914.1
PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family.
  
 
 0.711
AGB17352.1
Putative membrane-associated Zn-dependent protease; PFAM: Peptidase family M50.
  
  
 0.640
AGB15296.1
PFAM: 5-formyltetrahydrofolate cyclo-ligase family.
  
  
 0.634
AGB15732.1
Membrane protease subunit, stomatin/prohibitin; PFAM: SPFH domain / Band 7 family.
  
 0.567
AGB17018.1
Membrane protease subunit, stomatin/prohibitin; PFAM: SPFH domain / Band 7 family.
  
 0.567
AGB17003.1
ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase; PFAM: ACT domain.
 
     0.503
AGB16325.1
IclR-like transcriptional regulator; PFAM: IclR helix-turn-helix domain.
  
     0.483
nadK-2
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.459
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.