Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB17011.1Hypothetical protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; phenylacetic acid degradation protein PaaD. (149 aa)    
Predicted Functional Partners:
AGB16265.1
Hypothetical protein; PFAM: Phenylacetic acid catabolic protein; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit.
 
 
 0.974
AGB16267.1
PFAM: Phenylacetic acid catabolic protein; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit.
 
 
 0.973
AGB17012.1
Coenzyme F390 synthetase; PFAM: AMP-binding enzyme.
 
 
 0.961
AGB16266.1
Putative enzyme of phenylacetate metabolism; PFAM: Phenylacetic acid degradation B; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit.
  
  
  0.946
AGB16799.1
PFAM: Acetamidase/Formamidase family.
     
  0.900
AGB17010.1
Alpha-mannosidase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase.
  
    0.572
AGB17708.1
Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: ferredoxin [2Fe-2S].
 
    0.436
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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