Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB17085.1Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase. (412 aa)    
Predicted Functional Partners:
AGB16222.1
Hypothetical protein.
  
     0.650
AGB16243.1
PFAM: Protein of unknown function (DUF2910).
  
     0.566
AGB16220.1
PFAM: Polysaccharide deacetylase.
  
     0.559
AGB16233.1
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
  
     0.544
AGB16742.1
Hypothetical protein.
  
     0.544
AGB15662.1
NosL; PFAM: NosL.
  
     0.541
AGB16790.1
PFAM: E3 Ubiquitin ligase.
  
     0.541
AGB16525.1
PFAM: DNA methylase.
  
     0.536
AGB16732.1
Outer membrane lipoprotein-sorting protein.
  
     0.527
AGB16048.1
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; PFAM: UbiA prenyltransferase family.
  
     0.512
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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