Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB17123.1Uncharacterized protein, possibly involved in glyoxylate utilization; PFAM: Cupin domain. (105 aa)    
Predicted Functional Partners:
AGB17403.1
Site-specific recombinase XerD; PFAM: Phage integrase, N-terminal SAM-like domain.
  
     0.626
AGB17560.1
Hypothetical protein.
  
     0.623
AGB16629.1
Site-specific recombinase XerD; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family.
  
     0.582
AGB17122.1
PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase family.
 
     0.572
AGB16937.1
Putative HAD superfamily hydrolase; PFAM: haloacid dehalogenase-like hydrolase.
  
     0.560
AGB17124.1
Hypothetical protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.
       0.533
AGB16943.1
Hypothetical protein; PFAM: Adenosylcobinamide amidohydrolase.
  
     0.532
gatA
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
      
 0.530
AGB16793.1
Hypothetical protein.
  
     0.512
AGB17145.1
Hypothetical protein.
  
     0.483
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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