Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB17146.1Putative deacylase; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family. (361 aa)    
Predicted Functional Partners:
AGB17147.1
Threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase.
       0.911
AGB15086.1
Glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase); PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family.
 
     0.635
AGB17145.1
Hypothetical protein.
       0.581
argS
arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.530
AGB15924.1
alpha-L-glutamate ligase, RimK family; PFAM: RimK-like ATP-grasp domain; Protein of unknown function (DUF785); TIGRFAM: alpha-L-glutamate ligases, RimK family.
 
     0.514
AGB16900.1
NAD(P)H-nitrite reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
      
 0.460
AGB17245.1
ABC-type Fe3+ transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
  
   
 0.443
AGB15042.1
PFAM: RimK-like ATP-grasp domain; TIGRFAM: Lysine biosynthesis enzyme LysX; alpha-L-glutamate ligases, RimK family.
 
     0.427
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.