Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGB17179.1Hypothetical protein; PFAM: Domain of unknown function (DUF309). (206 aa)    
Predicted Functional Partners:
AGB16882.1
Putative metal-dependent membrane protease; PFAM: CAAX amino terminal protease family.
  
     0.605
AGB14808.1
Putative nuclease of the RecB family; PFAM: Protein of unknown function DUF91; Topoisomerase DNA binding C4 zinc finger.
  
     0.583
crcB
Integral membrane protein possibly involved in chromosome condensation; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
  
     0.562
AGB17321.1
PFAM: Arylsulfotransferase (ASST).
  
     0.525
AGB16036.1
PFAM: Cytochrome oxidase assembly protein.
  
     0.517
AGB17178.1
Putative RNA-binding protein, contains TRAM domain; PFAM: TRAM domain.
       0.494
AGB16193.1
Site-specific recombinase XerD.
  
     0.489
AGB17447.1
Hypothetical protein.
  
     0.474
AGB16609.1
Hypothetical protein.
  
     0.471
AGB16477.1
Flavin-dependent dehydrogenase; PFAM: FAD binding domain.
  
     0.468
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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