Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB17203.1PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain. (726 aa)    
Predicted Functional Partners:
AGB15831.1
Beta-galactosidase/beta-glucuronidase; PFAM: domain; Glycosyl hydrolases family 2, sugar binding domain.
 
   
 0.655
AGB17202.1
PFAM: Glucose / Sorbosone dehydrogenase.
     
 0.579
AGB17027.1
Penicillin-binding protein, beta-lactamase class C; PFAM: Beta-lactamase.
 
  
 0.577
AGB15719.1
Penicillin-binding protein, beta-lactamase class C; PFAM: Beta-lactamase.
 
  
 0.567
AGB17204.1
PFAM: Multicopper oxidase.
 
     0.534
AGB17108.1
Esterase/lipase; PFAM: alpha/beta hydrolase fold.
 
   
 0.426
AGB15137.1
Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase.
 
   
 0.425
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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