Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB17215.1DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase. (723 aa)    
Predicted Functional Partners:
AGB15076.1
Hypothetical protein.
 
     0.839
AGB15440.1
RecJ-like exonuclease with DnaJ-type Zn-finger domain; PFAM: DHH family; OB-fold nucleic acid binding domain.
  
    0.695
AGB16589.1
RecJ-like exonuclease with DnaJ-type Zn-finger domain; PFAM: S1 RNA binding domain; OB-fold nucleic acid binding domain.
  
    0.690
AGB15078.1
Zn-dependent protease; PFAM: CBS domain; Peptidase family M50.
 
     0.623
AGB16738.1
PFAM: Protein of unknown function (DUF555); Belongs to the UPF0212 family.
  
     0.559
AGB17216.1
Hypothetical protein.
       0.557
AGB17217.1
Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
       0.557
AGB16320.1
TIGRFAM: TIM-barrel protein, putative.
  
     0.551
AGB14764.1
Putative subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain.
  
     0.550
AGB16143.1
PFAM: Protein of unknown function (DUF555); Belongs to the UPF0212 family.
  
     0.517
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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