Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB17233.1PFAM: CAAX amino terminal protease family. (299 aa)    
Predicted Functional Partners:
AGB16681.1
Kef-type K+ transport system, membrane component; PFAM: Sodium/hydrogen exchanger family.
   
    0.691
AGB15104.1
Membrane-associated phospholipid phosphatase; PFAM: PAP2 superfamily.
 
    0.646
AGB17144.1
PFAM: Integral membrane protein DUF95.
  
    0.613
AGB17455.1
PFAM: HTH DNA binding domain.
  
     0.613
AGB16976.1
PFAM: Vitamin K-dependent gamma-carboxylase.
  
     0.590
AGB15716.1
PFAM: DoxX.
 
     0.585
AGB16078.1
PFAM: YcaO-like family; TIGRFAM: uncharacterized domain; bacteriocin biosynthesis docking scaffold, SagD family.
  
  
 0.580
AGB17616.1
PFAM: YcaO-like family; TIGRFAM: uncharacterized domain; bacteriocin biosynthesis docking scaffold, SagD family.
  
  
 0.580
AGB16814.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.
 
    0.543
AGB15370.1
Putative membrane protein; PFAM: Transmembrane exosortase (Exosortase_EpsH).
   
    0.530
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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