Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB17245.1ABC-type Fe3+ transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein. (375 aa)    
Predicted Functional Partners:
AGB17250.1
ABC-type Fe3+ transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.996
AGB15383.1
ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter; TOBE domain.
 
  
  0.958
AGB17246.1
Hypothetical protein.
 
     0.944
AGB17244.1
PFAM: Reversibly glycosylated polypeptide.
 
     0.898
AGB17243.1
Putative integral membrane protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
       0.796
AGB14799.1
ABC-type Fe3+ transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.760
AGB16426.1
ATPase component of ABC-type sugar transporter; PFAM: ABC transporter; TOBE domain.
 
    0.623
AGB17249.1
Hypothetical protein.
       0.458
AGB16900.1
NAD(P)H-nitrite reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
     
 0.457
AGB17242.1
PFAM: NAD dependent epimerase/dehydratase family.
       0.445
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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