Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB17246.1Hypothetical protein. (751 aa)    
Predicted Functional Partners:
AGB17244.1
PFAM: Reversibly glycosylated polypeptide.
 
     0.959
AGB17245.1
ABC-type Fe3+ transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
 
     0.944
AGB17243.1
Putative integral membrane protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
 
     0.870
AGB17250.1
ABC-type Fe3+ transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
     0.816
AGB17317.1
PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
 
     0.658
AGB16300.1
PFAM: Acetyltransferase (GNAT) family.
  
     0.568
AGB15024.1
Ca2+/Na+ antiporter; PFAM: Sodium/calcium exchanger protein.
  
     0.550
AGB16255.1
Halocyanin domain protein; PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: halocyanin domain.
  
     0.528
AGB15383.1
ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter; TOBE domain.
       0.527
AGB16787.1
Putative phosphatase; PFAM: haloacid dehalogenase-like hydrolase.
  
     0.517
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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