Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGB17247.1PFAM: Glycosyl transferase family 2. (298 aa)    
Predicted Functional Partners:
AGB17249.1
Hypothetical protein.
       0.818
AGB17248.1
Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase.
 
     0.710
AGB15243.1
PFAM: Glycosyl transferase family 2.
  
     0.523
AGB17438.1
PFAM: Glycosyl transferase family 2.
  
     0.511
AGB17251.1
Hypothetical protein; PFAM: Uncharacterised ACR, COG2135.
 
     0.475
AGB16167.1
Putative exonuclease.
       0.466
AGB15609.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2.
 
  
 0.462
AGB17250.1
ABC-type Fe3+ transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.455
AGB16195.1
PFAM: Glycosyl transferase family 2.
  
     0.446
AGB14805.1
TPR repeat-containing protein; PFAM: Tetratricopeptide repeat.
 
 
 0.420
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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