Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB17288.1Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily. (749 aa)    
Predicted Functional Partners:
AGB17290.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
  
 0.980
AGB17289.1
PFAM: Protein of unknown function DUF58.
 
     0.973
AGB16355.1
PFAM: Protein of unknown function DUF58.
 
  
 0.920
AGB16485.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
  
 0.910
AGB17446.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
  
 0.906
AGB17447.1
Hypothetical protein.
 
     0.855
AGB17443.1
PFAM: Protein of unknown function DUF58.
 
  
 0.764
AGB16676.1
PFAM: Catalase; DJ-1/PfpI family; Catalase-related immune-responsive.
   
   0.641
AGB17287.1
PFAM: Translation initiation factor SUI1; TIGRFAM: translation initation factor SUI1, putative, prokaryotic; Belongs to the SUI1 family.
       0.617
AGB17291.1
PFAM: 'Cold-shock' DNA-binding domain.
  
    0.476
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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