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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB17321.1PFAM: Arylsulfotransferase (ASST). (471 aa)    
Predicted Functional Partners:
AGB16925.1
PFAM: Major Facilitator Superfamily.
  
     0.611
AGB17472.1
PFAM: HTH DNA binding domain.
  
     0.601
AGB17447.1
Hypothetical protein.
  
     0.600
AGB15267.1
Hypothetical protein.
  
     0.584
AGB17322.1
PFAM: NAD dependent epimerase/dehydratase family.
 
     0.583
AGB15245.1
Hypothetical protein.
  
     0.579
AGB16273.1
PFAM: Acetyltransferase (GNAT) family.
  
     0.576
AGB16300.1
PFAM: Acetyltransferase (GNAT) family.
  
     0.543
AGB17179.1
Hypothetical protein; PFAM: Domain of unknown function (DUF309).
  
     0.525
AGB15578.1
PFAM: HTH DNA binding domain.
  
     0.511
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.