Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB17357.1Hypothetical protein; PFAM: Alpha/beta hydrolase of unknown function (DUF900). (238 aa)    
Predicted Functional Partners:
AGB15322.1
Orc1/cdc6 family replication initiation protein; Involved in regulation of DNA replication.
  
     0.567
AGB16790.1
PFAM: E3 Ubiquitin ligase.
 
     0.560
AGB15716.1
PFAM: DoxX.
  
     0.528
AGB17144.1
PFAM: Integral membrane protein DUF95.
  
     0.506
taw1
Wyosine biosynthesis protein TYW1; Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe).
  
     0.476
AGB15140.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
     0.467
AGB15492.1
PFAM: PAP2 superfamily.
  
     0.442
AGB15901.1
Chemotaxis protein CheC, inhibitor of MCP methylation; PFAM: CheC-like family.
  
     0.441
AGB15318.1
DNA polymerase elongation subunit (family B); PFAM: DNA polymerase family B.
  
     0.425
AGB16817.1
PFAM: Bacteriorhodopsin-like protein.
  
     0.422
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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